BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028D09LP1|AL428900
(875 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1035 1721 0.0
>3x_Contig1035
Length = 4175
Score = 1721 bits (868), Expect = 0.0
Identities = 875/876 (99%), Gaps = 1/876 (0%)
Strand = Plus / Plus
Query: 1 gatcgtagacctaatgcagcgtgtggaagagaataatgacagaaaagcgttagatatcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2092 gatcgtagacctaatgcagcgtgtggaagagaataatgacagaaaagcgttagatatcca 2151
Query: 61 tttggcagaaatttcagaactcaacggatcacagaaatggacagtaattgaccatcaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2152 tttggcagaaatttcagaactcaacggatcacagaaatggacagtaattgaccatcaaga 2211
Query: 121 gcaaacggaactcaaat-cacagacatgtatcgttgttgagaccgcatacaagtggggca 179
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2212 gcaaacggaactcaaatgcacagacatgtatcgttgttgagaccgcatacaagtggggca 2271
Query: 180 aacaatcgatgaaggaaaccgtagtaatgtgtgttgcattgctcaggttggatcaattcg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2272 aacaatcgatgaaggaaaccgtagtaatgtgtgttgcattgctcaggttggatcaattcg 2331
Query: 240 ataccgacgtcatcatttctgttcacgtgcctatctcatcggaacaagaactgaaggcca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2332 ataccgacgtcatcatttctgttcacgtgcctatctcatcggaacaagaactgaaggcca 2391
Query: 300 tggaacaggcaattgcgcaaaactcaccggaaaagctacctcaaagggtgcacgcgtcct 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2392 tggaacaggcaattgcgcaaaactcaccggaaaagctacctcaaagggtgcacgcgtcct 2451
Query: 360 attcgttgcttcgggacatgatctcgagcttcaaagtggaggatccatcgttatttgcat 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2452 attcgttgcttcgggacatgatctcgagcttcaaagtggaggatccatcgttatttgcat 2511
Query: 420 gatcgaaaccaggtatagtaaaagtatagtaaattatatatccgggtaatgaatttcttt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2512 gatcgaaaccaggtatagtaaaagtatagtaaattatatatccgggtaatgaatttcttt 2571
Query: 480 aagaatgagtgtttcaactatggaaatggtattatcaatgataaacaatacatacttatt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2572 aagaatgagtgtttcaactatggaaatggtattatcaatgataaacaatacatacttatt 2631
Query: 540 cctccatcagctagactctcaacggtatatcactacgagcgggagccctggtgttgatta 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2632 cctccatcagctagactctcaacggtatatcactacgagcgggagccctggtgttgatta 2691
Query: 600 gtggttcataacttgcgctatccgtgtgaagatggccaagggcaagagaaataactggag 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2692 gtggttcataacttgcgctatccgtgtgaagatggccaagggcaagagaaataactggag 2751
Query: 660 aaggatagccaccattgcaattccgttggtgtttgcagtggtggttcttttcaagatgct 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2752 aaggatagccaccattgcaattccgttggtgtttgcagtggtggttcttttcaagatgct 2811
Query: 720 taactacagtacgactgctgcagatttgcagacactattacagaatttacctaaggagat 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2812 taactacagtacgactgctgcagatttgcagacactattacagaatttacctaaggagat 2871
Query: 780 taatatgggttcttccgagcaatcagaccgtaaaattatggagaaatttgagaaattgag 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2872 taatatgggttcttccgagcaatcagaccgtaaaattatggagaaatttgagaaattgag 2931
Query: 840 ccaggatatgctaaagaaacaggacgatcaggcaag 875
||||||||||||||||||||||||||||||||||||
Sbjct: 2932 ccaggatatgctaaagaaacaggacgatcaggcaag 2967
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5903
Number of Sequences: 1807
Number of extensions: 5903
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 875
length of database: 10,358,551
effective HSP length: 16
effective length of query: 859
effective length of database: 10,329,639
effective search space: 8873159901
effective search space used: 8873159901
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)